I think the only difference plunge depth makes would be the amount of splinter guard you cut at the ends of the track. Since it bothered me to have untrimmed splinter guard at the ends I actually did two shallow cuts with two rails connected so that both rails got a full length trim. (rail 2 connected to the trailing end of rail 1; trim everything but the start of rail 1 and the end of rail 2; flip rails so the end of rail 2 and the start of rail 1 can be trimmed)