Hi Nash,
I am just cribbing an idea someone else here posted (I could not find the original thread) but it basically uses the shelf and side material to align the dominos. The photos show the basic setup using some scrap I had handy.
First lay the shelf flat on the side panel, aligning the top of the shelf to where it will ultimately fit on the side panel. Clamp the shelf down at both edges. In my photo the thin scrap represents the shelf, the red line is the top edge:
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Mark where you want your mortises on both pieces, the lay the domino on the side panel, align to your marks and plunge into the end of the shelf:
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Next reverse the domino, hold it against the shelf and plunge into the side panel:
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Since the bottom of the Domino itself is presses against the 2 surfaces that will match up it automatically spaces both rows of mortises 10mm from the top of the shelf.
Hope this helps.
RMW
PS - welcome to the FOG.