Yes they are handy. I also make adjustable stops with them and some scraps of BB similar to the TSO TDS ones but I just put a single 8mm grove and a cheap 8mm star knob from amazon. Works really good with the LR32 system. As far as dogs go I dont use them for squaring or cutting unless I have a set of holes dedicated to the anchor dogs that I have verified with the 5 cut test. Dogs rarely sit square in all directions even the supers which I also have. So I dont trust them the taller the dog the worse it gets. That's part of the issue too whenever you have any variances nothing is consistent, that's why I said you need to lock everything down as tight as possible first then concentrate on squaring. I know its all little amounts when looked at separately seem insignificant but once you start adding everything up it creates problems as you found out with your drawer bottoms. Then on top of that by the time you are done cutting up the job and routed dados, drilled shelf pins the panels can be flipped in such a way that the sum of all those small errors are now doubled when its time to assemble. I stand by my earlier suggestions lock
everything down tightly no play on anything,
extend the fence "solidly" under the track, and you should start to see much better and consistent results.
As far as the MFT I would seriously consider selling it and building a larger more permanent MFT outfeed table and putting another MFT type table on top of your sys cart and store it under the outfeed. so you can have a seperate table to assemble on and a separate cutting station. Im not sure about the hole size on a MFT either there seems to be some variances between hole sizes depending on what made the hole I can say that the
20mm UJK bit is a perfect match for the anchor dogs and so is the ujk chamfer tool.