I have had the same problem (I believe) when sanding for extended periods of time. Originally I bought the CT Sys for the one off projects (track saw cuts, routing, domino, etc) that are truly "one off" and didn't warrant the transport of my CT26. The CT Sys worked fine for these tasks as well as light cleanup. I am satisfied with it for these uses.
I did use it for a great deal of bare wood sanding and I believe the bag suffered because of that. I seem to recall carefully removing the bag and lightly shaking it, then reinstalling and it worked again for a time, but ultimately it started making the baffle closing noise.
Personally, I don't think there is a fault of the product, but rather me expecting dynamite from a small package. I simply don't think it is capable of that.