I have been a member of the FOG for awhile, but until now have never been moved to post anything until I saw this thread on the Incra Jig. I have thought for some time about using some form of the Incra Jig on my MFT 1080 from both the left and right sides of the guide rail (as well as some form of fence for crosscuts since I am not crazy about the fence on the 1080); but, I have just been too busy (or . . . uh . . . too lazy??) to build anything. I think that using some combination of Qwas dogs, rail dogs, and an Incra Jig fence system (which could be quickly squared to the 20mm holes with the aid of some Qwas dogs) would make for a nice, portable and reliable fence system for my MFT 1080.
Anyway, here are my thoughts on this thread (which are only theoretical since - did I mention - I have not actually built any Incra/MFT jig):
On using the jig from the right hand side, I have always thought it would not be a safety issue since, once you have your board set against the Incra Jig fence, it would be a simple matter to quickly move the Incra Jig fence away from the work piece so that no binding occurs and then make the cut. Then, after the cut, since the Incra Jig can be readily returned to its original start/zeroed position, you can quickly move it back to the original cutting width position and set up your next cut.
That being said, I think Jesus Aleman has the better take (in his post above) on using the Incra Jig - work from the left hand side of the guide rail with a spacer the width of the guide rail attached to the Incra Jig. Then you can make repeatable cuts anywhere from very narrow cuts up to the maximum amount of travel of the particular Incra Jig you are using (Jesus appears to be using one of the bigger Incra Jigs with up to 20" of travel) without having to move the Incra Jig setup to a new position on the MFT. Jesus - pictures of your setup would be great.
Well, that is my two cents - other than I think I need to go out and build an Incra/MFT jig for my 1080.
MBB